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Species belonging to selected taxon:

Carica papaya



ABOUT THIS RECORD

ID: MNEST002881
species: Carica papaya
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Carica papaya Carica Caricaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ACATCATCATCATCATCATCA

miRNA*
ATAATGGAGACGATGATGACA

mismatches: 4
bulges: 0

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pre-miRNA
CAGCCACCTGTACATCATCATCATCATCATCATCAAGATGGTACGGATGGTGGTGATAATTCGTCACGTGCAAATATCGAAACGTCGTCGTCTTCAGTGT
CAGATGGGACAATAGGTCAAGTCGAAAGTGACATGAACAACGTTTTTTATGAGACATGTGACGTGAATCATATCGATTGGTCGTATTGGAACATGTTGGA
TTCCGGAGTGACTGCATGCGATTTTGGGTTTGTCCCACCACCACCAGAACCAACCATTTTTGATAATGGAGACGATGATGACATCACCCCT


dot-bracket secondary structure
........(((.(((((((.((.((((.((((..((((((((..((.((((((((((....(((((((((...(((..(((((((.((.....(((.(((
(.(((..(((.....)))..)))......))))))))).))))))).)))....)))))))))...)))..((((..(((((((.((((((.........
)))))).)))))))....))))..((((.....))))..)))))))...)).)))))))))))).)))).)).))))))))))........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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